Dr. Siu Weng In, Shirley  蕭詠然
Assistant Professor

Academic Qualifications | Teaching | Research | Selected Publications | Professional Affiliations | Contact Details

Academic Qualifications
Related Working Experience
Teaching

B.Sc. Courses

  1. Programming Languages Architecture I (SFTW241)
  2. Software Psychology (SFTW300)
  3. Bioinformatics (Special Topics in CIS) (SFTW454)
  4. Information Security and Privacy (CISG113)

Research

Research Interests

Recent Research Projects
Academic Activities

(1) Invited Seminar Talks:

(2) Participated Conferences with Poster Presentation:


Awards & Titles Received
Selected Publications

    For the copyright reason, some papers cannot be distributed online. Please email me if you are interested to obtain a copy of them.

    Computational Biology related

    2012
  1. Maria Borisovska, Yvonne N. Schwarz, Madhurima Dhara, Antonio Yarzagaray, Sandra Hugo, Daniele Narzi, Shirley W. I. Siu, Jaideep Kesavan, Ralf Mohrmann, Rainer A. Böckmann, and Dieter Bruns. Membrane-Proximal Tryptophans of Synaptobrevin II Stabilize Priming of Secretory Vesicles. J. Neurosci. 32 (2012), 15983-15997. (Read online)
  2. Shirley W. I. Siu, Kristyna Pluhackova, Rainer A. Böckmann. Reparameterization of the OPLS-AA force field for hydrocarbons. J. Chem. Theory Comput. 8 (2012), 1459-1470 (Read online).

  3. 2010
  4. Ling Wang, Shirley W. I. Siu, Wei Gu, and Volkhard Helms. Downhill binding energy surface of the barnase-barstar complex. Biopolymers 93 (2010), 977–985 (Read online).
  5. Siti A. Jusoh, Christoph Welsch, Shirley W. I. Siu, Rainer A. Böckmann, and Volkhard Helms. Contribution of charged and polar residues for the formation of the E1-E2 heterodimer from Hepatitis C Virus. J. Mol. Modeling 16 (2010), 1625-1637 (Read online).

  6. 2009
  7. Shirley W. I. Siu and Rainer A. Böckmann. Low Free Energy Barrier for Ion Permeation Through Double-Helical Gramicidin. J. Phys. Chem. B 113 (2009), 3195-3202 (Read online).
  8. Robert Vácha, Shirley W.I. Siu, Michal Petrov, Rainer A. Böckmann, Justyna Barucha- Kraszewska, Piotr Jurkiewicz, Martin Hof, Max L. Berkowitz, Pavel Jungwirth. Effects of Alkali Cations and Halide Anions on the DOPC Lipid Membrane. J. Phys. Chem. A 113 (2009), 7235-7243 (Read online).
  9. Rui Wang, Shirley W.I. Siu, Rainer A. Böckmann. Fine-Grained Protein Mutation Extraction from Biological Literature. Proceedings of International Conference on Electronic Computer Technology 2009 401-405, Macau, China, IEEE Computer Society, 2009.2 (Read online, pdf).

  10. 2008
  11. Daniele Narzi, Shirley W.I. Siu, Christian U. Stirnimann, John P.A. Grimshaw, Rudi Glockshuber, Guido Capitani, Rainer A. Böckmann. Evidence for proton shuffling in a thioredoxinlike protein during catalysis. J. Mol. Biol. 382 (2008), 978-986 (Read online).
  12. Shirley W. I. Siu, Robert Vácha, Pavel Jungwirth, Rainer A. Böckmann. Biomolecular simulations of membranes: Physical properties from different force fields. J. Chem. Phys. 128 (2008), 125103 (Read online, pdf).
    Selected for April issue of Virtual Journal of Biological Physics Research.

  13. 2007
  14. Shirley W. I. Siu and Rainer A. Böckmann. Electric Field Effects on Membranes: Gramicidin A as a Test Ground. J. Struc. Biol. 157 (2007), 545-556 (Read online).

  15. 2006
  16. Iris Antes, Shirley W. I. Siu, and Thomas Lengauer. DynaPred: A structure and sequence based method for the prediction of MHC class I binding peptide sequences and conformations. Bioinformatics 22 (14): e16-e24 (Read online, pdf).

  17. Software Engineering related

    2004
  18. Antonio Leung, Simon Fong, Shirley W. I. Siu. Smart Card-based Irregular Access Patterns Detection System. IEEE International Conference on e-Technology, e-Commerce and e-Service (EEE 2004), Tapei, Taiwan, 28-31 March 2004, pp.546-553 (Read online).

  19. Simon Fong, Shirley W. I. Siu. An Integrative Framework of Predictive Mining Methods for Medical Prognosis. IASTED The 2nd International Conference on Biomedical Engineering (BioMED 2004), Innsbruck, Austria, 16-18 February 2004 (Read online).

  20. Simon Fong, Shirley W. I. Siu, Aixin Sun. Market Watcher Agent for E-Commerce. IASTED The International Conference on Artificial Intelligence and Applications (AIA 2004), Innsbruck, Austria, 16-18 February 2004 (Read online).

  21. Antonio Leung, Simon Fong, Shirley W. I. Siu. Smart Card-based Identification and Access Control Model with Real-time Suspicious Action Detection Mechanism. IASTED The International Conference on Artificial Intelligence and Applications (AIA 2004), Innsbruck, Austria, 16-18 February 2004 (Read online).

  22. 2003
  23. Shirley W. I. Siu, C. C. Fong, Z. S. Guo, K. F. Si Tou. Context-aware for Service Discovery in Ad Hoc Environment, The IASTED Intl. Conf. on Wireless and Optical Communication (WOC-2003), Banff, Canada, Jul. 14-16, 2003 (Read online, pdf).

  24. 2002
  25. Shirley W. I. Siu, H. M. Au. Solution for Electronic Ticket in Mobile Media. Proceedings of Macau IT Week 2002 Seminar Series, Macau, Oct 4-6 2002 (pdf).

  26. Shirley W. I. Siu, Z. S. Guo, C. C. Fong, Y. Zhuang, Extending E-Ticketing Service with Mobile Transactions. Proceedings of the 1st International Conference on Information Technology and Applications (ICITA-2002), Bathurst, Australia, Nov. 25-29, 2002 (pdf).

  27. C. C. Fong, Shirley W. I. Siu, and Aixin Sun, WebSpy: Retrieving Web Contents for e-Business Intelligence. Proceedings of the 1st International Conference on Information Technology and Applications (ICITA-2002), Bathurst, Australia, Nov. 25-29, 2002 (pdf).

  28. Z. S. Guo, Shirley W. I. Siu, C. T. Wong. Full-scale Online Event Ticketing System - The Design and Implementation. Proceeding of the 13th Chinese Process Control Conference, Macau and ZhuHai, China, Jul 29-Aug 2, 2002 (pdf).

  29. 2001
  30. Shirley W. I. Siu, Z. S. Guo. Application of Electronic Ticket to Online Trading with Smart Card Technology. Proceedings of the 6th INFORMS Conference on Information Systems and Technology (CIST-2001), Miami Beach, Florida, U.S., Nov.3-4 2001, pp.222-239 (pdf).

Professional Affiliations
Contact Details

Faculty of Science and Technology
University of Macau
Av. Padre Tomás Pereira, Taipa,
Macau, China

Room: N327B
Telephone: (853) 8397-4378
Fax: (853) 28838314 or (853) 3974285
Email: shirleysiu or siu_weng_in[at]gmail_[dot]_com (remove all the underscores)
Personal Homepage: http://www.cis.umac.mo/~shirleysiu